ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1ihmC1 - ECOD Domain | ECOD

ECOD/Domains/e1ihmC1

e1ihmC1

UID: 001696108

PDB

Range: C:3229-3277,C:3407-3520
PDB: 1IHM chain C(all domains)
UniProt: Q83884 (all domains)
Gene: ORF2

Molecule: Capsid protein VP1 (CP) (Coat protein) (p59) [Cleaved into: Soluble capsid protein (Protein 30k) (p30)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat, Calici_coat_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat, Calici_coat_C(1.2.1.4)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1IHM RCSB PDB: 1IHM PDBe: 1IHM UniProt: Q83884

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure