ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m8lC1 - ECOD Domain | ECOD

ECOD/Domains/e3m8lC1

e3m8lC1

UID: 001696243

PDB

Range: C:328-387,C:551-662
PDB: 3M8L chain C(all domains)
UniProt: A7L692 (all domains)

Molecule: Capsid protein VP1 (Coat protein)

3D Structure

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Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat(1.2.1.1)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3M8L RCSB PDB: 3M8L PDBe: 3M8L UniProt: A7L692

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