ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3skbJ1 - ECOD Domain | ECOD

ECOD/Domains/e3skbJ1

e3skbJ1

UID: 001696503

PDB

Range: J:223-530
PDB: 3SKB chain J(all domains)
UniProt: Q5EGK8 (all domains)

Molecule: Capsid

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat_C(10.2.1.43)

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3SKB RCSB PDB: 3SKB PDBe: 3SKB UniProt: Q5EGK8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure