ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pb6R1 - ECOD Domain | ECOD

ECOD/Domains/e4pb6R1

e4pb6R1

UID: 001696726

PDB

Range: R:328-387,R:551-662
PDB: 4PB6 chain R(all domains)
UniProt: A0A0J9X1Z3 (all domains)
Gene: VP1

Molecule: Capsid protein VP1 (Coat protein)

3D Structure

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Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat(1.2.1.1)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4PB6 RCSB PDB: 4PB6 PDBe: 4PB6 UniProt: A0A0J9X1Z3

Downloads

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