ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4pb6S3 - ECOD Domain | ECOD

ECOD/Domains/e4pb6S3

e4pb6S3

UID: 001696731

PDB

Range: S:328-387,S:551-662
PDB: 4PB6 chain S(all domains)
UniProt: A0A0J9X1Z3 (all domains)
Gene: VP1

Molecule: Capsid protein VP1 (Coat protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat(1.2.1.1)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4PB6 RCSB PDB: 4PB6 PDBe: 4PB6 UniProt: A0A0J9X1Z3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure