ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4rft11 - ECOD Domain | ECOD

ECOD/Domains/e4rft11

e4rft11

UID: 001696856

PDB

Range: 1:52-214
PDB: 4RFT chain 1(all domains)
UniProt: Q8JNX5 (all domains)

Molecule: Capsid protein alpha

3D Structure

Loading viewer...

Related Domains

Browse other domains in Capsid-VNN →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid-VNN(10.2.1.49)

Pfam Families

PF11729Capsid-VNN

nodavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4RFT RCSB PDB: 4RFT PDBe: 4RFT UniProt: Q8JNX5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure