ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rn5A1 - ECOD Domain | ECOD

ECOD/Domains/e4rn5A1

e4rn5A1

UID: 001697916

PDB

Range: A:270-427
PDB: 4RN5 chain A(all domains)
UniProt: O14786 (all domains)
Gene: NRP1

Molecule: Neuropilin-1

3D Structure

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Related Domains

Browse other domains in F5_F8_type_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyF5_F8_type_C(10.32.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
Glycerin

Pfam Families

PF00754F5_F8_type_C

F5/8 type C domain

ClanCL0202GBD

External Links

ECOD PDB View: 4RN5 RCSB PDB: 4RN5 PDBe: 4RN5 UniProt: O14786

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.