ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cq0C1 - ECOD Domain | ECOD

ECOD/Domains/e5cq0C1

e5cq0C1

UID: 001698279

PDB

Range: C:33-316
PDB: 5CQ0 chain C(all domains)
UniProt: P49302 (all domains)

Molecule: Capsid protein VP1

3D Structure

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Related Domains

Browse other domains in Polyoma_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPolyoma_coat(10.2.1.6)

Pfam Families

PF00718Polyoma_coat

Polyomavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5CQ0 RCSB PDB: 5CQ0 PDBe: 5CQ0 UniProt: P49302

Downloads

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