ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5c9fB1 - ECOD Domain | ECOD

ECOD/Domains/e5c9fB1

e5c9fB1

UID: 001699409

PDB

Range: B:104-231
PDB: 5C9F chain B(all domains)
UniProt: Q92FY8 (all domains)
Gene: RC1339

Molecule: Aspartyl protease

3D Structure

Loading viewer...

Related Domains

Browse other domains in gag-asp_proteas →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilygag-asp_proteas(1.1.1.8)

Pfam Families

PF13975gag-asp_proteas

gag-polyprotein putative aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 5C9F RCSB PDB: 5C9F PDBe: 5C9F UniProt: Q92FY8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure