ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5cmsD1 - ECOD Domain | ECOD

ECOD/Domains/e5cmsD1

e5cmsD1

UID: 001700129

PDB

Range: D:2-174
PDB: 5CMS chain D(all domains)
UniProt: P0A8D6 (all domains)
Gene: ymdB

Molecule: O-acetyl-ADP-ribose deacetylase (EC 3.1.1.106) (Regulator of RNase III activity)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Macro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyMacro(7529.1.1.1)

Pfam Families

Macro domain

ClanCL0223MACRO

External Links

ECOD PDB View: 5CMS RCSB PDB: 5CMS PDBe: 5CMS UniProt: P0A8D6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure