ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a9qM1 - ECOD Domain | ECOD

ECOD/Domains/e5a9qM1

e5a9qM1

UID: 001701006

PDB

Range: M:667-924
PDB: 5A9Q chain M(all domains)
UniProt: P57740 (all domains)
Gene: NUP107

Molecule: Nuclear pore complex protein Nup107 (107 kDa nucleoporin) (Nucleoporin Nup107)

3D Structure

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Related Domains

Browse other domains in Nup84_Nup100 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin Nup84/Nup107(109.30)

TT-groupNucleoporin Nup84/Nup107(109.30.1)

FFamilyNup84_Nup100(109.30.1.1)

Pfam Families

PF04121Nup84_Nup100

Nuclear pore protein 84 / 107

ClanCL0020TPR

External Links

ECOD PDB View: 5A9Q RCSB PDB: 5A9Q PDBe: 5A9Q UniProt: P57740

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