ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cmpB3 - ECOD Domain | ECOD

ECOD/Domains/e4cmpB3

e4cmpB3

UID: 001705372

PDB

Range: B:58-447,B:502-713
PDB: 4CMP chain B(all domains)
UniProt: Q99ZW2 (all domains)
Gene: cas9

Molecule: CRISPR-associated endonuclease Cas9/Csn1 (EC 3.1.-.-) (SpCas9) (SpyCas9)

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819)

HH-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819.1)

TT-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819.1.1)

FFamily(3819.1.1.2)

Pfam Families

PF16592Cas9_REC

REC lobe of CRISPR-associated endonuclease Cas9

ClanCL0693Cas9_lobe

PF16593Cas9-BH

Bridge helix of CRISPR-associated endonuclease Cas9

External Links

ECOD PDB View: 4CMP RCSB PDB: 4CMP PDBe: 4CMP UniProt: Q99ZW2

Downloads

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