ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3aqpB2 - ECOD Domain | ECOD

ECOD/Domains/e3aqpB2

e3aqpB2

UID: 001710245

PDB

Range: B:473-558
PDB: 3AQP chain B(all domains)
UniProt: Q5SKE6 (all domains)
Gene: secDF

Molecule: Protein translocase subunit SecDF

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sec_GG →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilySec_GG(304.28.1.2)

Pfam Families

SecD/SecF GG Motif

External Links

ECOD PDB View: 3AQP RCSB PDB: 3AQP PDBe: 3AQP UniProt: Q5SKE6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure