ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2p5oD1 - ECOD Domain | ECOD

ECOD/Domains/e2p5oD1

e2p5oD1

UID: 001711257

PDB

Range: D:375-481,D:537-734
PDB: 2P5O chain D(all domains)
UniProt: Q38087 (all domains)
Gene: 43

Molecule: DNA-directed DNA polymerase (EC 2.7.7.7) (EC 3.1.11.-) (Gp43)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_B(304.48.1.3)

Pfam Families

PF00136DNA_pol_B

DNA polymerase family B

ClanCL0194DNA_pol_B-like

External Links

ECOD PDB View: 2P5O RCSB PDB: 2P5O PDBe: 2P5O UniProt: Q38087

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure