ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a4iM1 - ECOD Domain | ECOD

ECOD/Domains/e5a4iM1

e5a4iM1

UID: 001714698

PDB

Range: M:336-405
PDB: 5A4I chain M(all domains)

Molecule: Hydrogenase-1 large chain

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturebeta meanders(a.2)

XX-groupall-beta domain in nickel-iron hydrogenase large subunit(4046)

HH-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1)

TT-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1.1)

FFamilyNiFeSe_Hases(4046.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 5A4I RCSB PDB: 5A4I PDBe: 5A4I

Downloads

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Drug annotations from DrugDomain.