ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fj9F1 - ECOD Domain | ECOD

ECOD/Domains/e5fj9F1

e5fj9F1

UID: 001715116

PDB

Range: F:71-153
PDB: 5FJ9 chain F(all domains)
UniProt: P20435 (all domains)
Gene: RPO26

Molecule: DNA-directed RNA polymerases I, II, and III subunit RPABC2 (RNA polymerases I, II, and III subunit ABC2) (ABC23) (DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb6 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRPB6/omega subunit-like(152)

HH-groupRPB6/omega subunit-like(152.1)

TT-groupRPB6(152.1.1)

FFamilyRNA_pol_Rpb6(152.1.1.1)

Pfam Families

PF01192RNA_pol_Rpb6

RNA polymerase Rpb6

External Links

ECOD PDB View: 5FJ9 RCSB PDB: 5FJ9 PDBe: 5FJ9 UniProt: P20435

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure