ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fkvB3 - ECOD Domain | ECOD

ECOD/Domains/e5fkvB3

e5fkvB3

UID: 001715172

PDB

Range: B:123-244
PDB: 5FKV chain B(all domains)
UniProt: P0A988 (all domains)
Gene: dnaN

Molecule: Beta sliding clamp (Beta clamp) (Sliding clamp) (Beta-clamp processivity factor) (DNA polymerase III beta sliding clamp subunit)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol3_beta_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA clamp(227)

HH-groupDNA clamp(227.1)

TT-groupDNA clamp(227.1.1)

FFamilyDNA_pol3_beta_2(227.1.1.7)

Pfam Families

PF02767DNA_pol3_beta_2

DNA polymerase III beta subunit, central domain

ClanCL0060DNA_clamp

External Links

ECOD PDB View: 5FKV RCSB PDB: 5FKV PDBe: 5FKV UniProt: P0A988

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure