ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fmf21 - ECOD Domain | ECOD

ECOD/Domains/e5fmf21

e5fmf21

UID: 001715189

PDB

Range: 2:256-309
PDB: 5FMF chain 2(all domains)
UniProt: P07273 (all domains)
Gene: DST1

Molecule: TRANSCRIPTION ELONGATION FACTOR S-II, DST1

3D Structure

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Related Domains

Browse other domains in TFIIS_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTFIIS_C(375.1.1.7)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01096Zn_ribbon_TFIIS

Transcription factor S-II (TFIIS)

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5FMF RCSB PDB: 5FMF PDBe: 5FMF UniProt: P07273

Downloads

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