ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5fj8I1 - ECOD Domain | ECOD

ECOD/Domains/e5fj8I1

e5fj8I1

UID: 001715763

PDB

Range: I:1-42
PDB: 5FJ8 chain I(all domains)
UniProt: Q04307 (all domains)
Gene: RPC11

Molecule: DNA-directed RNA polymerase III subunit RPC10 (RNA polymerase III subunit C10) (DNA-directed RNA polymerases III 12.5 kDa polypeptide) (RNA polymerase III subunit C11)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_POL_M_15KD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRNA_POL_M_15KD(375.1.1.19)

Pfam Families

PF02150Zn_ribbon_RPB9

RNA polymerases M/15 Kd subunit

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5FJ8 RCSB PDB: 5FJ8 PDBe: 5FJ8 UniProt: Q04307

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure