ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rrvB1 - ECOD Domain | ECOD

ECOD/Domains/e1rrvB1

e1rrvB1

UID: 001718327

PDB

Range: B:1-220
PDB: 1RRV chain B(all domains)
UniProt: Q9AFC7 (all domains)
Gene: gtfD

Molecule: GLYCOSYLTRANSFERASE GTFD

3D Structure

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Related Domains

Browse other domains in Glyco_transf_28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_28(7512.1.1.10)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103

+ 1 additive (Glycerin)

Pfam Families

PF03033Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

ClanCL0113GT-B

External Links

ECOD PDB View: 1RRV RCSB PDB: 1RRV PDBe: 1RRV UniProt: Q9AFC7

Downloads

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GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.