ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5cdnS1 - ECOD Domain | ECOD

ECOD/Domains/e5cdnS1

e5cdnS1

UID: 001719204

PDB

Range: S:417-638
PDB: 5CDN chain S(all domains)
UniProt: P66937 (all domains)
Gene: gyrB

Molecule: DNA gyrase subunit B (EC 5.6.2.2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_gyraseB_C,Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyDNA_gyraseB_C,Toprim(2006.1.3.1)

Pfam Families

PF00986DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

Toprim domain

ClanCL0413Toprim-like

External Links

ECOD PDB View: 5CDN RCSB PDB: 5CDN PDBe: 5CDN UniProt: P66937

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure