ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5flxE1 - ECOD Domain | ECOD

ECOD/Domains/e5flxE1

e5flxE1

UID: 001720784

PDB

Range: E:2-116
PDB: 5FLX chain E(all domains)
UniProt: P22090 (all domains)
Gene: RPS4Y1

Molecule: Small ribosomal subunit protein eS4, Y isoform 1 (40S ribosomal protein S4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S4e,RS4NT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4e,RS4NT(221.1.2.4)

Pfam Families

PF00900Ribosomal_S4e

Ribosomal family S4e

ClanCL0021OB

RS4NT (NUC023) domain

External Links

ECOD PDB View: 5FLX RCSB PDB: 5FLX PDBe: 5FLX UniProt: P22090

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure