ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ylqH1 - ECOD Domain | ECOD

ECOD/Domains/e4ylqH1

e4ylqH1

UID: 001721623

PDB

Range: H:16-257
PDB: 4YLQ chain H(all domains)
UniProt: P08709 (all domains)
Gene: F7

Molecule: Coagulation factor VII

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Propyl alcoholPOL
drugDrugBank DB03175
TetramethylammoniumTMA
drugDrugBank DB03095
N-acetyl-D-phenylalanyl-N-[(2S,3S)-6-carbamimidamido-1-chloro-2-hydroxyhexan-3-yl]-L-phenylalaninamide

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4YLQ RCSB PDB: 4YLQ PDBe: 4YLQ UniProt: P08709

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ionCA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.