ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xdhB1 - ECOD Domain | ECOD

ECOD/Domains/e4xdhB1

e4xdhB1

UID: 001723396

PDB

Range: B:1-230
PDB: 4XDH chain B(all domains)
UniProt: P16083 (all domains)
Gene: NQO2

Molecule: Ribosyldihydronicotinamide dehydrogenase [quinone]

3D Structure

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Related Domains

Browse other domains in Flavodoxin_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_2(2007.2.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
5-methoxy-2-(4-methoxyphenyl)-3H-indol-3-one3ZV
Zinc ionZN

Pfam Families

PF02525Flavodoxin_2

Flavodoxin-like fold

ClanCL0042Flavoprotein

External Links

ECOD PDB View: 4XDH RCSB PDB: 4XDH PDBe: 4XDH UniProt: P16083

Downloads

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metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.