ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5c18B1 - ECOD Domain | ECOD

ECOD/Domains/e5c18B1

e5c18B1

UID: 001723680

PDB

Range: B:107-200
PDB: 5C18 chain B(all domains)
UniProt: P55072 (all domains)
Gene: VCP

Molecule: Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CDC48_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyCDC48_2(229.1.1.1)

Pfam Families

PF02933CDC48_2

Cell division protein 48 (CDC48), domain 2

ClanCL0402Cdc48_2-like

External Links

ECOD PDB View: 5C18 RCSB PDB: 5C18 PDBe: 5C18 UniProt: P55072

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure