ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fojB1 - ECOD Domain | ECOD

ECOD/Domains/e5fojB1

e5fojB1

UID: 001726466

PDB

Range: B:1-165
PDB: 5FOJ chain B(all domains)
UniProt: P18474 (all domains)

Molecule: RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein (2C-CP)]

3D Structure

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Related Domains

Browse other domains in Nepo_coat_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyNepo_coat_N(10.2.1.38)

Pfam Families

PF03689Nepo_coat_N

Nepovirus coat protein, N-terminal domain

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5FOJ RCSB PDB: 5FOJ PDBe: 5FOJ UniProt: P18474

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