ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yuuY21 - ECOD Domain | ECOD

ECOD/Domains/e4yuuY21

e4yuuY21

UID: 001726571

PDB

Range: Y2:16-40
PDB: 4YUU chain Y2(all domains)
UniProt: Q9TLX0 (all domains)
Gene: psb30

Molecule: Photosystem II reaction center protein Ycf12

3D Structure

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Related Domains

Browse other domains in PSII_Ycf12 →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein ycf12(3379)

HH-groupPhotosystem II reaction center protein ycf12(3379.1)

TT-groupPhotosystem II reaction center protein ycf12(3379.1.1)

FFamilyPSII_Ycf12(3379.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133within 5 Å only
Beta-caroteneBCR
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Pfam Families

PF05969PSII_Ycf12

Photosystem II complex subunit Ycf12

External Links

ECOD PDB View: 4YUU RCSB PDB: 4YUU PDBe: 4YUU UniProt: Q9TLX0

Downloads

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Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.