ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ftmB1 - ECOD Domain | ECOD

ECOD/Domains/e5ftmB1

e5ftmB1

UID: 001732024

PDB

Range: B:107-200
PDB: 5FTM chain B(all domains)
UniProt: P55072 (all domains)
Gene: VCP

Molecule: Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CDC48_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyCDC48_2(229.1.1.1)

Pfam Families

PF02933CDC48_2

Cell division protein 48 (CDC48), domain 2

ClanCL0402Cdc48_2-like

External Links

ECOD PDB View: 5FTM RCSB PDB: 5FTM PDBe: 5FTM UniProt: P55072

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure