ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5eg8B1 - ECOD Domain | ECOD

ECOD/Domains/e5eg8B1

e5eg8B1

UID: 001736719

PDB

Range: B:321-483
PDB: 5EG8 chain B(all domains)
UniProt: G3LZH2 (all domains)
Gene: PB2

Molecule: Polymerase basic protein 2

3D Structure

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Related Domains

Browse other domains in Flu_PB2_5th →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPolymerase basic protein 2 cap-binding domain(3521)

HH-groupPolymerase basic protein 2 cap-binding domain(3521.1)

TT-groupPolymerase basic protein 2 cap-binding domain(3521.1.1)

FFamilyFlu_PB2_5th(3521.1.1.1)

Ligands

in contact, ≤ 4 Å

Thiocyanate ionSCN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00604Flu_PB2_5th

Influenza RNA polymerase PB2 CAP binding domain

External Links

ECOD PDB View: 5EG8 RCSB PDB: 5EG8 PDBe: 5EG8 UniProt: G3LZH2

Downloads

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