ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4itmA2 - ECOD Domain | ECOD

ECOD/Domains/e4itmA2

e4itmA2

UID: 001738171

RepresentativePDB

Range: A:207-297
PDB: 4ITM chain A(all domains)
UniProt: O67572 (all domains)
Gene: lpxK

Molecule: Tetraacyldisaccharide 4'-kinase

3D Structure

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Related Domains

Browse other domains in LpxK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTetraacyldisaccharide 4'-kinase C-terminal domain(7591)

HH-groupTetraacyldisaccharide 4'-kinase C-terminal domain(7591.1)

TT-groupTetraacyldisaccharide 4'-kinase C-terminal domain(7591.1.1)

FFamilyLpxK(7591.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171

+ 2 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol)

GlycerinGOL
DrugBank DB09462

Pfam Families

Tetraacyldisaccharide-1-P 4'-kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4ITM RCSB PDB: 4ITM PDBe: 4ITM UniProt: O67572

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-Diol

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.