ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ecwB1 - ECOD Domain | ECOD

ECOD/Domains/e5ecwB1

e5ecwB1

UID: 001738781

PDB

Range: B:2-132
PDB: 5ECW chain B(all domains)
UniProt: O06662 (all domains)
Gene: vapC

Molecule: tRNA(fMet)-specific endonuclease VapC (EC 3.1.-.-) (RNase VapC) (Toxin VapC)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Pfam Families

PIN domain

ClanCL0280PIN

External Links

ECOD PDB View: 5ECW RCSB PDB: 5ECW PDBe: 5ECW UniProt: O06662

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure