ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4n3zA1 - ECOD Domain | ECOD

ECOD/Domains/e4n3zA1

e4n3zA1

UID: 001756237

PDB

Range: A:225-368
PDB: 4N3Z chain A(all domains)
UniProt: Q9UJ41 (all domains)
Gene: RABGEF1

Molecule: Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in VPS9 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupRABEX-5 helical domain(633.24)

TT-groupRABEX-5 helical domain(633.24.1)

FFamilyVPS9(633.24.1.1)

Pfam Families

Vacuolar sorting protein 9 (VPS9) domain

ClanCL0785VPS9

External Links

ECOD PDB View: 4N3Z RCSB PDB: 4N3Z PDBe: 4N3Z UniProt: Q9UJ41

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure