ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n15A1 - ECOD Domain | ECOD

ECOD/Domains/e4n15A1

e4n15A1

UID: 001758234

PDB

Range: A:27-146,A:236-327
PDB: 4N15 chain A(all domains)
UniProt: Q0B2F6 (all domains)
Gene: Bamb_6123

Molecule: TRAP dicarboxylate transporter, DctP subunit

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

beta-D-glucuronic acidBDP
drugDrugBank DB03156
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4N15 RCSB PDB: 4N15 PDBe: 4N15 UniProt: Q0B2F6

Downloads

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