ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ogqC3 - ECOD Domain | ECOD

ECOD/Domains/e4ogqC3

e4ogqC3

UID: 001759009

PDB

Range: C:251-289
PDB: 4OGQ chain C(all domains)
UniProt: Q93SW9 (all domains)
Gene: petA

Molecule: Apocytochrome f

3D Structure

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Related Domains

Browse other domains in Apocytochr_F_C →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024)

HH-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024.1)

TT-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024.1.1)

FFamilyApocytochr_F_C(5024.1.1.1)

Ligands

in contact, ≤ 4 Å

Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686
(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate7PH
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

Pfam Families

PF01333Apocytochr_F_C

Apocytochrome F, C-terminal

ClanCL0105Hybrid

External Links

ECOD PDB View: 4OGQ RCSB PDB: 4OGQ PDBe: 4OGQ UniProt: Q93SW9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.