ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4e4dR1 - ECOD Domain | ECOD

ECOD/Domains/e4e4dR1

e4e4dR1

UID: 001759571

PDB

Range: R:7-63
PDB: 4E4D chain R(all domains)
UniProt: O08712 (all domains)
Gene: Tnfrsf11b

Molecule: Tumor necrosis factor receptor superfamily member 11B (Osteoclastogenesis inhibitory factor) (Osteoprotegerin)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TNFR_c6 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupTNF receptor-like(389.1.3)

FFamilyTNFR_c6(389.1.3.1)

Pfam Families

PF00020TNFR_c6

TNFR/NGFR cysteine-rich region

ClanCL0607TNF_receptor

External Links

ECOD PDB View: 4E4D RCSB PDB: 4E4D PDBe: 4E4D UniProt: O08712

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure