ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ddyG2 - ECOD Domain | ECOD

ECOD/Domains/e5ddyG2

e5ddyG2

UID: 001763796

PDB

Range: G:332-385
PDB: 5DDY chain G(all domains)
UniProt: Q9UGP5 (all domains)
Gene: POLL

Molecule: DNA polymerase lambda

3D Structure

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Related Domains

Browse other domains in DNA_pol_lambd_f →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyDNA_pol_lambd_f(102.1.1.21)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10391DNA_pol_lambd_f

Fingers domain of DNA polymerase lambda

ClanCL0198HHH

External Links

ECOD PDB View: 5DDY RCSB PDB: 5DDY PDBe: 5DDY UniProt: Q9UGP5

Downloads

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