ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ee3A2 - ECOD Domain | ECOD

ECOD/Domains/e5ee3A2

e5ee3A2

UID: 001763864

PDB

Range: A:304-387
PDB: 5EE3 chain A(all domains)
UniProt: Q6Z1J6 (all domains)
Gene: YCHF1

Molecule: Obg-like ATPase 1 (EC 3.6.5.-) (Ribosome-binding ATPase YchF) (OsYchF1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in YchF-GTPase_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyYchF-GTPase_C(221.1.1.27)

Pfam Families

PF06071YchF-GTPase_C

Protein of unknown function (DUF933)

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5EE3 RCSB PDB: 5EE3 PDBe: 5EE3 UniProt: Q6Z1J6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure