ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jd2A1 - ECOD Domain | ECOD

ECOD/Domains/e2jd2A1

e2jd2A1

UID: 001772602

PDB

Range: A:11-150,A:266-291
PDB: 2JD2 chain A(all domains)
UniProt: P9WNS1 (all domains)
Gene: dxr

Molecule: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE

3D Structure

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Related Domains

Browse other domains in DXP_reductoisom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyDXP_reductoisom(2003.1.1.33)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02670DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2JD2 RCSB PDB: 2JD2 PDBe: 2JD2 UniProt: P9WNS1

Downloads

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Drug annotations from DrugDomain.