ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lq2B1 - ECOD Domain | ECOD

ECOD/Domains/e3lq2B1

e3lq2B1

UID: 001772702

PDB

Range: B:56-470
PDB: 3LQ2 chain B(all domains)
UniProt: P0AFG9 (all domains)
Gene: aceE

Molecule: Pyruvate dehydrogenase E1 component

3D Structure

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Related Domains

Browse other domains in Transketolase_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransketolase_N(7574.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Thiamine diphosphateTPP
within 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PF00456Transketolase_N

Transketolase, thiamine diphosphate binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 3LQ2 RCSB PDB: 3LQ2 PDBe: 3LQ2 UniProt: P0AFG9

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.