ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3bwqA1 - ECOD Domain | ECOD

ECOD/Domains/e3bwqA1

e3bwqA1

UID: 001778055

PDB

Range: A:31-297
PDB: 3BWQ chain A(all domains)
UniProt: P03087 (all domains)

Molecule: Major capsid protein VP1 (Major structural protein VP1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Polyoma_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPolyoma_coat(10.2.1.6)

Pfam Families

PF00718Polyoma_coat

Polyomavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3BWQ RCSB PDB: 3BWQ PDBe: 3BWQ UniProt: P03087

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure