ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3k5lA5 - ECOD Domain | ECOD

ECOD/Domains/e3k5lA5

e3k5lA5

UID: 001779210

PDB

Range: A:-2-39,A:109-148
PDB: 3K5L chain A(all domains)
UniProt: P21189 (all domains)
Gene: polB

Molecule: DNA polymerase II (Pol II) (EC 2.7.7.7)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNApolII_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNApolII_N(2.1.1.112)

Pfam Families

PF21474DNApolII_N

DNA polymerase II, N-terminal

ClanCL0021OB

External Links

ECOD PDB View: 3K5L RCSB PDB: 3K5L PDBe: 3K5L UniProt: P21189

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure