ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5agrA1 - ECOD Domain | ECOD

ECOD/Domains/e5agrA1

e5agrA1

UID: 001779985

PDB

Range: A:313-513
PDB: 5AGR chain A(all domains)
UniProt: P9WFV1 (all domains)
Gene: leuS

Molecule: LEUCINE--TRNA LIGASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilytRNA-synt_1_2(1.1.1.7)

Ligands

in contact, ≤ 4 Å

3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosineA52

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13603tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

ClanCL0039HUP

External Links

ECOD PDB View: 5AGR RCSB PDB: 5AGR PDBe: 5AGR UniProt: P9WFV1

Downloads

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