ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i5rD1 - ECOD Domain | ECOD

ECOD/Domains/e5i5rD1

e5i5rD1

UID: 001780628

PDB

Range: D:35-382
PDB: 5I5R chain D(all domains)
UniProt: Q8A3I4 (all domains)
Gene: BT_2970

Molecule: Alpha-L-fucosidase

3D Structure

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Related Domains

Browse other domains in Alpha_L_fucos →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha_L_fucos(2002.1.1.51)

Ligands

in contact, ≤ 4 Å

(2S,3S,4R,5S,2'S,3'S,4'R,5'S)-2,2'-(butane-1,4-diyl)bis(5-methylpyrrolidine-3,4-diol)68F

+ 2 additives (Imidazole, Sulfate ion)

ImidazoleIMD
DrugBank DB03366
Sulfate ion

Pfam Families

PF01120Alpha_L_fucos

Alpha-L-fucosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5I5R RCSB PDB: 5I5R PDBe: 5I5R UniProt: Q8A3I4

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.