ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d1pB1 - ECOD Domain | ECOD

ECOD/Domains/e5d1pB1

e5d1pB1

UID: 001788104

PDB

Range: B:7-248
PDB: 5D1P chain B(all domains)
UniProt: O27289 (all domains)
Gene: MTH_1221

Molecule: Conserved protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_ligase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_ligase(206.1.3.23)

Pfam Families

PF09414RNA_ligase

RNA ligase

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 5D1P RCSB PDB: 5D1P PDBe: 5D1P UniProt: O27289

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure