ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ha9B2 - ECOD Domain | ECOD

ECOD/Domains/e5ha9B2

e5ha9B2

UID: 001788483

PDB

Range: B:0-120
PDB: 5HA9 chain B(all domains)
UniProt: P09874 (all domains)
Gene: PARP1

Molecule: Poly [ADP-ribose] polymerase 1

3D Structure

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Related Domains

Browse other domains in PARP_reg →

Classification

AArchitecturealpha bundles(a.7)

XX-groupDomain of poly(ADP-ribose) polymerase(609)

HH-groupDomain of poly(ADP-ribose) polymerase(609.1)

TT-groupDomain of poly(ADP-ribose) polymerase(609.1.1)

FFamilyPARP_reg(609.1.1.1)

Ligands

in contact, ≤ 4 Å

AmitriptylineTP0
drugDrugBank DB00321

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF02877PARP_reg

Poly(ADP-ribose) polymerase, regulatory domain

External Links

ECOD PDB View: 5HA9 RCSB PDB: 5HA9 PDBe: 5HA9 UniProt: P09874

Downloads

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Sulfate ion

Shown in the structure viewer. Drug annotations from DrugDomain.