ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iaiA1 - ECOD Domain | ECOD

ECOD/Domains/e5iaiA1

e5iaiA1

UID: 001788586

PDB

Range: A:33-154,A:314-431
PDB: 5IAI chain A(all domains)
UniProt: B9JM84 (all domains)
Gene: Arad_9887

Molecule: Sugar ABC transporter

3D Structure

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Related Domains

Browse other domains in SBP_bac_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_1(7523.1.1.8)

Ligands

in contact, ≤ 4 Å

RibitolRB0
drugDrugBank DB14704

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 5IAI RCSB PDB: 5IAI PDBe: 5IAI UniProt: B9JM84

Downloads

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Drug annotations from DrugDomain.