ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hwjD1 - ECOD Domain | ECOD

ECOD/Domains/e5hwjD1

e5hwjD1

UID: 001791320

PDB

Range: D:1-303
PDB: 5HWJ chain D(all domains)
UniProt: Q8UB77 (all domains)
Gene: Atu3140

Molecule: Probable 5-dehydro-4-deoxyglucarate dehydratase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5HWJ RCSB PDB: 5HWJ PDBe: 5HWJ UniProt: Q8UB77

Downloads

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