ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hwnB1 - ECOD Domain | ECOD

ECOD/Domains/e5hwnB1

e5hwnB1

UID: 001791326

PDB

Range: B:1-303
PDB: 5HWN chain B(all domains)
UniProt: Q8UB77 (all domains)
Gene: Atu3140

Molecule: Probable 5-dehydro-4-deoxyglucarate dehydratase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5HWN RCSB PDB: 5HWN PDBe: 5HWN UniProt: Q8UB77

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.