ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2j3tD1 - ECOD Domain | ECOD

ECOD/Domains/e2j3tD1

e2j3tD1

UID: 001806455

RepresentativePDB

Range: D:2-22,D:102-215
PDB: 2J3T chain D(all domains)
UniProt: Q9Y296 (all domains)
Gene: TRAPPC4

Molecule: Trafficking protein particle complex subunit 4 (Hematopoietic stem/progenitor cell protein 172) (Synbindin) (TRS23 homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sybindin →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupprofilin-like(223.2)

TT-groupprofilin-like(223.2.1)

FFamilySybindin(223.2.1.8)

Pfam Families

PF04099Sybindin

Sybindin-like family

ClanCL0431PF

External Links

ECOD PDB View: 2J3T RCSB PDB: 2J3T PDBe: 2J3T UniProt: Q9Y296

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure