ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3oktA2 - ECOD Domain | ECOD

ECOD/Domains/e3oktA2

e3oktA2

UID: 001806515

RepresentativePDB

Range: A:509-559
PDB: 3OKT chain A(all domains)
UniProt: P70207 (all domains)
Gene: Plxna2

Molecule: Plexin-A2

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Chloride ionCL
within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

ECOD PDB View: 3OKT RCSB PDB: 3OKT PDBe: 3OKT UniProt: P70207

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.